Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954394.1_cds_XP_016493275.1_83401
CDS Infomation

[gene=LOC107812643] [db_xref=GeneID:107812643] [protein=NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like] [protein_id=XP_016493275.1] [location=complement(join(28408..28521,28613..28729,29309..29687,29990..30145,30735..30871,31177..31296,31742..31870,32263..32456,33709..33853))] [gbkey=CDS]
Sequence

ATGGCAGGTAATGGAGTGTTTGTAGATATAATTGAGGGAGATGTGTTTAAGTACTATTCT
GAAGGAGAATGGAAGAAATCAGCTTCTGGAAAATCTGTTGCCATCATTAATCCTACTACT
AGAAAAACACAGTATAAGGTTCAAGCATGTACACAAGAAGAGGTGAACAAGGTAATGGAA
GTAGCGAAAGCGGCACAAAAATCATGGTCGAAAACACCACTCTGGAAAAGAGCTGAGCTG
CTTCATAAGGCAGCTGCAATCTTGAAAGAACACAAAGCCCCTATTGCAGAATGTCTTGTA
AAAGAAATTGCAAAACCAGCTAAAGATGCTGTCACTGAGGTTGTAAGATCTGGAGATTTG
GTTTCTTATACTGCTGAAGAAGGAGTTAGAATTCTTGGGGAGGGTAAGTTCTTGGTTTCT
GATAGTTTCCCTGGAAATGAAAGGACCAAATACTGCCTCACTTCCAAGATCCCGTTGGGT
GTGATTCTAGCCATTCCTCCTTTCAACTATCCAGTCAATCTTGCCGTCTCCAAGATTGCT
CCTGCACTAATTGCTGGGAACTCTTTAGTTCTCAAGCCACCAACTCAGGGTGCTGTGGCT
TGCCTTCATATGGTGCATTGCTTCCACTTAGCTGGATTTCCGAAAGGCCTTATCAGTTGT
GTGACGGGAAAAGGTTCTGAAATCGGTGATTTTCTCACTATGCATCCCGGAGTACACTGT
ATAAGCTTCACTGGTGGAGATACCGGCGTCGCAATCTCAAAGAAAGCAGGAATGATCCCT
CTACAGATGGAGCTCGGAGGAAAGGATGCTTGTATTGTGCTTGAGGATGCTGATTTAGAT
TTGGCTGCTGGAAGCATTGTGAAAGGAGGGTTTTCTTACAGCGGTCAAAGATGCACAGCC
GTTAAGGTCGTGTTGGTGATGGAATCAGTTGCTGACACTCTTGTTGAGAAGGTAAATGCT
AAAGTGGCAAAATTAACCGTTGGGCCACCAGAAGATGATTGCGATATCACTCCAGTTGTC
TCTGAATCATCTGCAAACTTCATCGAGGGGTTGGTCATGGACGCGAAGCAGAAAAATGCA
ACTTTTTGCCAGCAATACAAGAGAGAAGGCAACCTCATTTGGCCCTTGTTGTTAGACAAT
GTTAGGCCAGACATGAGGATTGCATGGGAAGAACCATTCGGGCCAGTTTTGCCTGTTATT
CGGATCAACTCTGTCGAAGAAGGAATTCACCACTGCAACGCTAGCAATTTCGGTCTGCAG
GGTTGTGTATTCACCAAAGACATCAACAAAGCAATACTTATCAGTGATGCCATGGAAACA
GGAACAGTTCAGATTAACTCAGCCCCGGCTCGTGGACCGGATCATTTTCCATTCCAGGGA
ATTAAGGACAGTGGAATTGGATCACAAGGGATTACTAACAGCATTAACATGATGACCAAA
GTCAAGACTACTGTTATCAACTTGCCAACCCCATCTTATACTATGGGGTAA

Peptide Sequence

PEP ID

XP_016493275.1
PEP Infomation

PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase-like [Nicotiana tabacum]
Sequence

MAGNGVFVDIIEGDVFKYYSEGEWKKSASGKSVAIINPTTRKTQYKVQACTQEEVNKVME
VAKAAQKSWSKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDL
VSYTAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIA
PALIAGNSLVLKPPTQGAVACLHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVHC
ISFTGGDTGVAISKKAGMIPLQMELGGKDACIVLEDADLDLAAGSIVKGGFSYSGQRCTA
VKVVLVMESVADTLVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKQKNA
TFCQQYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQ
GCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTK
VKTTVINLPTPSYTMG

Transcript Sequence

Gene sequence data has not been registered.